Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------------MYQVGSLVEMKKPHACVIKETGKKANQWKVLRVGADIKIQCTNCQHVIMMSRYDFERKLKKVLQP
3LAY Chain:A ((44-122))
LTTEQQATAQKIYDDYYTQTSALRQQLISKRYEYNALLTASSPDTAKINAVAKEMESLGQKLDEQRVKRDVAMAQAGIP
General information:
TITO was launched using:
RESULT:
Template:
3LAY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4627 for 343 contacts (13.5/contact) +
2D Compatibility (PS) -6700 + (NN) -2204 + (LL) 0
1D Compatibility (HY) 4000 + (ID) 150
Total energy: -427.0 ( -1.24 by residue)
QMean score : 0.080
(partial model without unconserved sides chains):
PDB file :
Tito_3LAY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LAY-query.scw
PDB file :
Tito_Scwrl_3LAY.pdb
: