Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYNTILKDTLSKGLFTAHQKVLIAVSGGIDSINLLQFLYQYQKELSISIGIAHINHGQRKESEKEEEYIRQWGQIHDVPVFISYFQG------------IFSEDRARNHRYNFFSKVMREEGYTALVTAHHADDQAETVFMRILRGSRLRYLSGIKQV--SAFANGQLIRPFLPYKKELLPN------IFHFEDASNASSDYLRNRIRNVYFPALERENNQLKDSLITLSEETECLFTALTDLTRSIEVTNCYDFLRQTHSVQEFLLQDYISKFPDLQVSKEQFRVILKLIRTKANIDYTIKSGYFLHKDYESFHITKIHPKTDSFKVEKRLELHNIQIFSQYLFSYGKFISQADITIPIYDTSPIILRRRKEGDRIFLGNHTKKIRRLFIDEKITLKEREEAVIGEQNKELIFVIVAGRTYLRKPSEHDIMKGKLYIENLEKR |
| 3VRH Chain:A ((36-255)) | ------RTIERYKLLTKDERILVAVSGGKDSAVTAYVLKKL----GYNIECLHINLGISGYSEKSEEYAKKQCKLIGAPLHIVRIKEILGYGIGEVKTRRPPCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLLNNILHWNTEY-LAKGGPILPQQGKFIKKVKPLYEVTEREVVAYALAVGLEYIVEECPY----TTLDMKG-VLNELEEKRPGTKFNFVRGYLKKKKLFEPKECKICRMPSSGDICAFCKFWGLKKEINFKVSSTDEEPFG--------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VRH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85488 for 1497 contacts (-57.1/contact) +
2D Compatibility (PS) -21316 + (NN) -4371 + (LL) 14624
1D Compatibility (HY) -6400 + (ID) 1950
Total energy: -104901.0 ( -70.07 by residue)
QMean score : 0.320
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