Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKRALISVSDKSGIIDFAKELKNLGWDIISTGGTKVALDDAGVETIAIDDVTGFPEMMDGRVKTLHPNIHGGLLARRDADSHLQAAKDNNIELIDLVVVNLYPFKETILRPDVTYDLAVENIDIGGPSMLRSAAKNHASVTVVVDSADYATVLGELADASQTTFKTRQRLAAKAFRHTAAYDALIAEYFTAQVGEA-KPEKLTITYDLKQAMRYGENPQQDADFYQKALPTDYSIASAKQLNGKELSFNNIRDADAAIRIIRDFKDSPTVVALKHMNPCGIGQADDIETAWDYAYEADPVSIFGGIVVLNREVDAATAEKMHPIFLEIIIAPSYSEEALAILTNKKKNLRILELPFDAQAASEVEAEYTGVVG-GLLVQNQDVVAENPSDWQVVTDRQPTEQEATALEFAWKAIKYVKSNGIIITNDHMTLGLGAGQTNRVGSVKIAIEQAKDHLDGAVLASDAFFPFADNIEEIAAAGIKAIIQPGGSVRDQESIDAANKHGLTMIFTGVRHFRH |
1ZCZ Chain:B ((14-464)) | --KRILVSLYEKEKYLDILRELHEKGWEIWASSGTAKFLKSNGIEANDVSTITGFENLLGGLVKTLHPEIFAGILGPEPR--------------WDVVFVDLYP------PPD---------IDIGGVALLRAAAKNWKKVKPAFDMETLKLAI-EIDDE-----ETRKYLAGMTFAFTSVYDSIRANQFVEGISLAFKREDLQ--------LRYGENPHEKAFVYGK---PAFEILH----EGKTISFNNILDAENAWFMAKNLPRMGAVV-VKHQSPCGAAIGEDKVEIVKKAIEADDESSFGGILAVNFEMDEEVAKSLKK-YLEVIVAPSFTQEAIEVLSKKK--VRLLK-PGDY-------ASWAGKMAFGSLVLSERKYPEG--NFELVVGEPLSEKELEDLEFAYRVVEGAKSNAVLIAKDGVTVGIGSGQPSRKRAAWIATVMAGEKAKGAVAASDAFFPFPDSLEILAQAGVKAVVAPLGSIRDEEVIEKARELGITFYKAPSRVFRH |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZCZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -210153 for 3699 contacts (-56.8/contact) +
2D Compatibility (PS) -48905 + (NN) -18200 + (LL) 5360
1D Compatibility (HY) -34400 + (ID) 9050
Total energy: -315348.0 ( -85.25 by residue)
QMean score : 0.471
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