Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIKKSVIGFCLGAAALSMFACVDSSQSVMAAEKDKVEITWWAFPTFTQEKAKDGVGTYEKKVIKAFEKKNPNIKVKLETIDFTSGPEKITTAIEAGTAPDVLFDAPGRIIQYGKNGKLADLNDLFTDQFIKDVNNKNIIQASKSGDKAYMYPISSAPFYMAFNKKMLKDAGVLKLVKEGWTTSDFEKVLKALKNKGYTPGSFFANGQGGDQGPRAFFANLYSAPITDKEV-----TKYTTDTKNSVKSMKKIVEWIKKGYLMNGSQYDGSADIQNFANGQTAFTILWAPAQPKTQAKLLESSKVDYLEVPFPSEDG-KPDLEYLVNGFAVFNNKDENKVKASKKFITFIADDKKWGPKDVIRTGAFPVRTSFGD--LYKGDKRMMKISKWTQYYSPYYNTIDGFSEMRTLWFPMVQSVSNGDEKPADALKDFTQKANDTIKKAAK |
| 2ZYO Chain:A ((13-395)) | ------------------------------KSEGKPDKLVVWENADDG------VQLNNTKKWAGEFTKK-TGIQVEVVPVALLKQQEKLTLDGPAGKGADLVTWPHDRLGEAVTKGLLQPIQVDNS--VKNQFDDVAMKA-LTYGGKLYGLPKAIESVALIYNKKLMGQ------VPA--TYDELFQYAKANNKPDEQKYGVLFE-A-NNFYYTYFLFAAKGAAVFKEQDGTLDPNEIGLNSPEAVQGMNEVQKWFTEARLPQSL--KADTVNGLFKSGKVAAVINGPWAIKDYQA-----AGINVGVAPLPKIDGKDAQTFIGVKGWYLSAY--SKYPKYATELMQFLTSKEAL-ASRFKETGEIPPQKELLNDPMIKNNPVVNGFAKQAS-KGVPMPSIPEMGVVWEPINNAHTFVAQGKQTPEQALNDAVKIMKEKIQTMKQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZYO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60274 for 3241 contacts (-18.6/contact) +
2D Compatibility (PS) -39786 + (NN) -15159 + (LL) 3932
1D Compatibility (HY) -9200 + (ID) 3150
Total energy: -123637.0 ( -38.15 by residue)
QMean score : 0.359
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