Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLLVVGSGGREH-AIAKKLLASKDVDQVFVAPGNDGM-TLD-GLDLVNIGISEHSRLIDFAKENEIAWTFIGPDDALAAGIVDDFNSAGLRAFGPTKAAAELEWSKDFAKEIMVKYNVPTAAYGTFSDFEKAKAYIEEQGAPIVVKADGLALGKGVVVAETVEQAVEAAQEMLLDNKFGDSGARVVIEEFLDGEEFSLFAFANGDKFYIMPTAQDHKRAFDGDKGPNTGGMGAYAPVPHLPQSVVDTAVET-----IIKPVLEGMIAEGRPYLGVLYAGLILTA-DGPKVIEFNSRFGDPETQIILPRLTSDFAQNIDDIMMGIEPYIT--WQKDGVTLGVVVASEGYPLDYEKGVPLPEKTD---GDIITYYAGAKFAENSKALLSNGGRVYMLVTTEGSVKAGQDKIYTQLAQQDTTGLFYRNDIGSKAIK |
| 3MJF Chain:A ((4-427)) | MNILIIGNGGREHALGWKAAQS--PLADKIYVAPGNAGTALEPTLENVDIAATDIAGLLAFAQSHDIGLTIVGPEAPLVIGVVDAFRAAGLAIFGPTQAAAQLEGSKAFTKDFLARHNIPSAEYQNFTDVEAALAYVRQKGAPIVIKADGLAAGKGVIVAMTQEEAETAVNDMLAGNAFGDAGHRIVVEEFLDGEEASFIVMVDGENVLPMATSQDHKRVGDGDTGPNTGGMGAYSPAPVVTDDVHQRVM-DQVIWPTVRGMAAEGN---I-YTGFLYAGLMISADGQPKVIEFNCRFGDPETQPIMLRMRSDLVELCLAGTQGKLNEKTSDWDER-PSLGVVLAAGGYPADYRQGDVIHGLPQQEVKDGKVFHAGTKLNGN-HEVVTNGGRVLCVTALGETVAQAQQYAYQLAEGIQWEGVFCRKDIGYRAIA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MJF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212398 for 3625 contacts (-58.6/contact) +
2D Compatibility (PS) -45169 + (NN) -19619 + (LL) -124
1D Compatibility (HY) -24800 + (ID) 8800
Total energy: -310910.0 ( -85.77 by residue)
QMean score : 0.526
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