Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNFKITRTHLEILSLIIIVVFGLSVFTLTTSSQGVLSYDGGKIKYVGSIVNHHMTGKGKL--TY--ENGDY-------YKG--DFVNGVFEGKGTFVSVHGWSYTGDFKKGQPDGQGRLNAKNKKVYKGTFKQGIYQK
1B0P Chain:B ((448-538))
--------------------------------AQGYFSYDSKKSG--GITISHLRFGEKPIQSTYLVNRADYVACHNPAYVGIYDILEGIKDG-GTFVLNSPWSSLEDMDKHLPSGIKRTIA-NKKLKFYNIDAVKIAT
General information:
TITO was launched using:
RESULT:
Template:
1B0P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5236 for 379 contacts (13.8/contact) +
2D Compatibility (PS) -8555 + (NN) -3846 + (LL) 3792
1D Compatibility (HY) -3600 + (ID) 1650
Total energy: -8623.0 ( -22.75 by residue)
QMean score : -0.064
(partial model without unconserved sides chains):
PDB file :
Tito_1B0P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B0P-query.scw
PDB file :
Tito_Scwrl_1B0P.pdb
: