Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLQEIKDFVKELR--GLSQEELAKKENELKKELFDLRFQAAAGQLEKTARLDEVKKQIARVKTVQSEMK
1G6U Chain:A ((1-47))
-SLAALKSELQALKKEGFSPEELAALESELQALEKKLAALKSKLQALKG---------------------
General information:
TITO was launched using:
RESULT:
Template:
1G6U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2313 for 204 contacts (11.3/contact) +
2D Compatibility (PS) -5284 + (NN) -5849 + (LL) 2500
1D Compatibility (HY) -1200 + (ID) 750
Total energy: -8270.0 ( -40.54 by residue)
QMean score : 0.705
(partial model without unconserved sides chains):
PDB file :
Tito_1G6U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G6U-query.scw
PDB file :
Tito_Scwrl_1G6U.pdb
: