Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MELEVFAGQEKSELSMIEVAR-AILEQRGRDNEMYFSDLVNDIQTYLGKSDSA-----IRESLPFFYSDLNTDGSFIPLG------ENKWGLRSWYAIDEIDEEIITLEEDEDGAPKRKKKRVNAFMDGDEDAIDYNDDDPEDEDFTEETPSLEYDEENPDDEKSEVESYDSEINEIIPDEDLDEDVEINEEDDEEEEEEEEV |
| 3L2C Chain:A ((23-104)) | ---------AWGNQSYAELISQAIESAPEK--RLTLAQIYEWMVRTVPYFKDKGDSNSSAGWKNSIRHNLSLHSKFIKVHNEATGKSSWWMLN-------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L2C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18150 for 451 contacts (-40.2/contact) +
2D Compatibility (PS) -7183 + (NN) 331 + (LL) 6228
1D Compatibility (HY) -2800 + (ID) 450
Total energy: -22024.0 ( -48.83 by residue)
QMean score : 0.330
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