Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLFSEIFKFCISILWYFILTKNKGVVVMRAWKGIVLILSSIVVTLVAWQNAGLSEFVVPGLALTSLSLTFLLSTKFRILESYFQGIENMYFYHKVMAVFSMILLLLHKIGLGQGGHGSEFAKTIGSAGLYLFLSIVFVAYFGNFLKYEIWRFIHRFVYLVYILGLVHTFLILGDRILGNTLLSLIVLGYAVIGVISGFYIIFLYSRMRFRRVGYVQKVTHLNHD-----TTEIEIAMKRPYRYDYGQFTFLKIYQAGF---ESAAHPFSISGGHD------RVIFLTVKAS-----------GDYTKSIYKQLKVGTKIALDRAYGHMLFDK--DKKEQVWIAGGIGITPFISFIRENSIL-------TKRVDFFYTFSNQDNLIYQDMLESYAKANP-NFKLHLNNSSLQ-----------GRLD-----FSQSVFEGQPTIFMCGPTSMTSTYAKVFRQKDAKSRLVYEGFSFRDSWLSIFLLKTFDKVYSNLIK |
| 3VO2 Chain:A ((34-310)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVGRCLSNTRITGDDAPGETWHMVFSTEGEIPYREGQSIGIIADGEDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNDQGEIVKGVCSNFLC-DLKPGADVKITGPVGKEMLMPKDPNATVIMLATGTGIAPFRSFLWKMFLEEHEDYKFSGLAWLFLGVPTSDSLLYKEELEKMKEMAPDNFRLDFAVSREQTNAAGEKMYIQTRMAEYREELWELLKKDNTYVYMCGLKGMEKGIDDIMLNLAAKDGIDWMQYKKQLKKGEQWNVEVY--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VO2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138125 for 1802 contacts (-76.7/contact) +
2D Compatibility (PS) -24106 + (NN) -4027 + (LL) 20760
1D Compatibility (HY) -13200 + (ID) 2250
Total energy: -160948.0 ( -89.32 by residue)
QMean score : 0.473
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