Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------------------------------------------------------------------MVSALLKFDFSVVRHNMAIKLNNNFLIIMGTSFLLLLAYHIKKEGKEVLSSLFVISNFFDNSTLFFVIIVVMRVVAGTFGGRPLKTLDGKTTRPTTDKVKGAIFNMIGPFFEGGRVLDLFSGSGSLAIEAISRGMDQAVLVEKDRRAQVVIQENIAMTK-SPEQFQLLKMEANRALEQLT---GQFDLVLLDPPYAK--------EEIVKQIQIMDSKGLLGDDIMIVCETDKSVDLPEEIASFGIWKQKIYGISKVTVYVR-------------------------- |
| 3LDF Chain:A ((1-385)) | MIKLMVGSFAEKKLKRGVQLLSSRDYPNLNLDNQVVQLYSDADIFLGTAYLSKQNKGVGWLISPKKVSLNVTYFIKLFQWSKDKRKNFAHSKLTTAYRLFNQDGDSFGGVTIDCYGDFVLFSWYNSFVYQIRDEIVAAFRQVYPNFLGAYEKIRF----NVSAHLYGQEAPEQFLILEN-----GISYNVFLNDGLMTGIF-------LDQRQVRNELIN----------GSAAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSFARNKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMT----VSQFKKQIEKGFGKQKHTYLDLQQLPSDFAVNVQDESSNYLKVFTIKV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LDF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95544 for 1608 contacts (-59.4/contact) +
2D Compatibility (PS) -23845 + (NN) -8190 + (LL) 1660
1D Compatibility (HY) -6400 + (ID) 1700
Total energy: -134019.0 ( -83.35 by residue)
QMean score : 0.348
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