Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIVGEQEARALIKPRPKSSHKGDYGSVLLIGGFYPYGGAIIMAALACVKTGAGLVTVATQSCNIPSLHSQLPEVMAFDSDDYKWLEKSIVQS-DVIVIGPGLGVSESSRKILNQTMEKIQSHQSVIIDGSALTLLSEGAFPQTKAKNLVLTPHQKEWERLSGIAVSQQTKENTQTALKSFPK-GTILVAKSSHTRI-FQDLDEKEIIVGGPYQATGGMGDTLCGMIAGMLAQFKEASPLDKVSVGVYLHSAIAQELSKE--AYVVLPTTISDEIPKEMARLSK |
| 3RQ2 Chain:A ((11-278)) | ----EEHVRATLPERDAESHKGTYGTALLLAGSDDMPGAALLAGLGAMRSGLGKLVIGTSENVIPLIVPVLPEATYWRDGWKKAADAQLEETYRAIAIGPGLPQTESVQQAVDHVL---TADCPVILDAGA---LAKRTYPKREGP-VILTPHPGEFFRMTGVPVNELQKKRAEYAKEWAAQLQTVIVLKGNQTVIAFPDGDCWLNPTGNGALAKGGTGDTLTGMILGMLCCHED--PKHAVLNAVYLHGACAELWTDEHSAHTLLAHELSDILPRVWKRFE- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3RQ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -147275 for 2380 contacts (-61.9/contact) +
2D Compatibility (PS) -27720 + (NN) -1640 + (LL) 1216
1D Compatibility (HY) -9600 + (ID) 4350
Total energy: -189369.0 ( -79.57 by residue)
QMean score : 0.565
|
|
|