Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDIKAEIQKLAKEIGISKIGFTTADNFDYLEKSLRASVEEGRNSGFEHKVIEDRIYPERLLESAKTIISIGVAYPHKLPQQPQKTSYKRGKITPNSWGLDYHYVVGEKLDRLSKGIEELCRDFPLQQKAMVDTGALVDTAVAQRAGIGFIGKNGLVISKEYGSYMFLGELITNLEIEPDKPVDYDCGDCRRCLDACPTSCLIGD---GSMNAKRCLSFQTQDKGMMDIEFRKKIKTVIYGCD------ICQICCPYNKGINNPLATEIDPELAQPELIPFLSLSNGQFKEKFGMIAGSWRGKNILQRNAIIALANAHDKTAVVKLIEIIDKNNNPIHTATAIWALGEIVKKPNDEILEFMSNLTLKDEDSRKELELIRHKWQF |
2FGO Chain:A ((6-58)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DDCINCDVCEPECPNGAISQGEEIYVIDPNLCT-----------------------ECVGHYDEPQCQQVCPVDCIPLDDANVESKDQLMEKYRKITGK----------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2FGO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -21109 for 253 contacts (-83.4/contact) +
2D Compatibility (PS) -4628 + (NN) -3172 + (LL) 21048
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -10461.0 ( -41.35 by residue)
QMean score : 0.407
|
|
|