Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKRLVKIVTIIRNNKIRTLIFVMGSLILLFPIVSQVSYYLASHQNINQFKREVAKIDTNTVERRIALANAYNETLSRNPLLIDPFTSKQKE-GLREYARMLEVHEQIGHVAIPSIGVDIPIYAGTSETVLQKGSGHLEGTSLPVGGLSTHSVLTAHRGLPTARLFTDLNKVKKGQIFYVTNIKETLAYKVVSIKVVDPTALSEVKIVNGKDYITLLTCTPYMINSHRLLVKGERIPYDSTEAEKHKEQTVQDYRLSLVLKILLVLLIGLFIVIMMRRWMQHRQ |
| 3G66 Chain:B ((2-199)) | -------------------------------------------NEVIKEFDETVSQMDKAELEERWRLAQAFNATLKPSEIL-DPFTE--KKKGVSEYANMLKVHERIGYVEIPAIDQEIPMYVGTSEDILQKGAGLLEGASLPVGGENTHTVITAHRGLPTAELFSQLDKMKKGDIFYLHVLDQVLAYQVDQIVTVEPNDFEPVLIQHGEDYATLLTCTPYMINSHRLLVRGKRIPYTAPI------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G66.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96966 for 1531 contacts (-63.3/contact) +
2D Compatibility (PS) -20966 + (NN) -5505 + (LL) 10320
1D Compatibility (HY) -22000 + (ID) 5500
Total energy: -140617.0 ( -91.85 by residue)
QMean score : 0.530
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