Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKETLILLYGGRSAEREVSVLSAESVMRAINYDKFFVKTYFITQVGQFIKTQEFDEMPSSDEKLMTNQTVDLDKMVRPSDIYDDNAIVFPVLHGPMGEDGSIQGFLEVLRMPYVGTNILSSSVAMDKITTKQVLATVGVPQVAYQTYFEGDDLEHAIKLSLETLSFPIFVKPANMGSSVGISKATDESSLRSAIDLALKYDSRILIEQGVTA-REIEVGILGNNDVKTTFPGEVVKDVDFYDYDAKYIDNKITMDIPAKVDEATMEAMRQYASKAFKAIGACGLSRCDFFLTKDGQIFLNELNTMPGFTQWSMYPLLWENMGLTYSDLIEKLVMLAKEMFEKRESHLI
2ZDH Chain:B ((3-317))-----VLLIAGGVSPEHEVSLLSAEGVLRHI---PFPTDLAVIAQDGRWLLGEK------ALTALEAKAAPEGEHPFPPPLSWERYDVVFPLLHGRFGEDGTVQGFLELLGKPYVGAGVAASALCMDKDLSKRVLAQAGVPVVPWVAVRKGEPPVVPFDPPFFV-------KPANTGSSVGISRVERFQDLEAALALAFRYDEKAVVEKALSPVRELEVGVLGNVFGEASPVGEVRYEAPFY-------PGRAELLIPAPLDPGTQETVQELALKAYKVLGVRGMARVDFFLA-EGELYLNELNTIPGFTPTSMYPRLFEAGGVAYPELLRRLVELALT----------


General information:
TITO was launched using:
RESULT:

Template: 2ZDH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -142919 for 2640 contacts (-54.1/contact) +
2D Compatibility (PS) -33526 + (NN) -12843 + (LL) 2608
1D Compatibility (HY) -23200 + (ID) 6300
Total energy: -216180.0 ( -81.89 by residue)
QMean score : 0.514

(partial model without unconserved sides chains):
PDB file : Tito_2ZDH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2ZDH-query.scw
PDB file : Tito_Scwrl_2ZDH.pdb: