Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLSLHEVAKVVGAKNQVSEFEDVPLGNIEFDSRNISEGDLFLPLKGARDGHEFIEMAFDNGAIATISEKEIEGHPYLLVSDALKAFQVLAQYYIEKMNVDVIAVTGSNGKTTTKDMIAAILST-TYK-TYKTQGNYNNEIGLPYTVLHMPEDTEKIILEMGQDHLGDIHVLSEIAKPRIAVVTLIGEAHLEFFG-SREKIAEGKMQITDG-MSSDGILIAPGD-PIID-PYLPANQMT-IRFGHD--QELQVTELKEEKHSLTFKTN-A-L-EHQLRIPVPGKYNATNAMVAAYVGKLLAVAEEDIVDALENLQLTRNRTEWKKS----ANGADILSDVYNANPTAMRLILETFSAIPNNDGGKKIALLADMKELGEQSVDLHNQMIMSIRPDSIDTLICYGQDI-----------EGLAQLASQMFPIGKVYFFKKNQEVDQFDQLLAKVKDTLKEKDQILLKGSNSM-NL-SKIVDILEVG |
| 1P3D Chain:A ((118-473)) | ---------------------------------------------------------------------------------------------------RHGIAVAGTHGKTTTTAMISMIYTQAKLDPTFVN-GGL----VKSAGKNAHLGASRYLIAEADESDA-----SFLHLQPMVSVVTNMEPDHMDTYEGDFEKMKATYVKFLHNLP-FYGLAVMCADDPVLMELVPKV-GRQVITYGFSEQADYRIEDYEQTGFQGHYTVICPNNERINVLLNVPGKHNALNATAALAVAKEEGIANEAILEALADFQGAGRRFDQLGEFIRPNGKVRLVDD-YGHHPTEVGVTIKAAREGWG--DKRIVMIFQPHR--YSRTRDLFDDFVQVLSQ--VDALIMLDVYAAGEAPIVGADSKSLCRSIRNLGK-VDPILVSDTSQLG------DVLDQIIQDGDLILAQGAGSVSKISRGLAESW--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P3D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132734 for 2827 contacts (-47.0/contact) +
2D Compatibility (PS) -34454 + (NN) -6746 + (LL) 8748
1D Compatibility (HY) -12400 + (ID) 3050
Total energy: -180636.0 ( -63.90 by residue)
QMean score : 0.365
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