Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTRSKLAAGFLTLMSVATLAACSGKTSNGTNVVTMKGDTITVSDFYDQVKTSKAAQQSMLTLILSRVFDTQYGDKVSDKKVSEAYNKTAKGYGNSFSSALSQAGLTPEGYKQQIRTTMLVEYAVKEAAKKELTEANYKEAYKNYTPETSVQVIKLDAE---------------DKAKSVLKDVKADGADFAKIAKEKTTATD---KKVEY-KFDSAGTSLPKEVMSAAFKLDKNGVSDVVSTVDSTTYKTSYYIIKVTDKTEKKSDWKSYKNRLKEVILKDKTSDRSFQNKVISKALEKANVKIKDKAFAGILSQYATTSGSSSLKK |
2JZV Chain:A ((141-244)) | ---------------------------------------------------------------------------------------------------------------------------------------------------SKKASHILIKVKSKKSDKEGLDDKEAKQKAEEIQKEVSKDPSKFGEIAKKESMDTGSAKKDGELGYVLK--GQTDKDFEKALFKLKDGEVSEVVKSSF------GYHIIKADK-------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JZV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34678 for 605 contacts (-57.3/contact) +
2D Compatibility (PS) -9151 + (NN) -4599 + (LL) 14436
1D Compatibility (HY) -3200 + (ID) 1300
Total energy: -38492.0 ( -63.62 by residue)
QMean score : 0.703
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