Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYLAPVLTIAGTDPSGGAGIMADLKTFQARRTYGMAVVTSVVAQNT-CGVRGVQHIETAIIDQQLACVYDDIKPKAVKTGMLAERETISLVAS-YLKKYPQPYVLDPVMVATSGHRLIDSDAVEALKEDLLPLATIITPNLPEAEILVGYDLSDEVSIIKAGYDIQKQYSVRNVLIKGGHLDGLAKDY-LFLEKEGLITLSNQRINTIHTHGTGCTFAAVVAAELAKGQSILNAVSTAKSFITSAIETAPELGLGNGPVNHTSYQGD |
| 4C5N Chain:B ((3-264)) | ---LKKVLTIAGSDTSAGAGMQADLKTFQELDTYGMVALTAIVTMDKDTWSHDVTPLPMDVFEKQLETALS-IGPDAIKTGMLGTEEIIKRAGEVYEASNAQYFVVDPVMV-------LNPGNTEAMIKYLLPKATVVTPNLFEAGQLSGLGKLNSIEDMKKAATIIFDKGAQHVIIKGGKALDQDKSYDLYYDGQTFYQLTTDMFQQSYNHGAGCTFAAATTAYLANGKSPKEAVISAKAFVASAIKNGWKMNDFVGPVDHGAYNRI |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4C5N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -123455 for 2276 contacts (-54.2/contact) +
2D Compatibility (PS) -27359 + (NN) -8493 + (LL) 592
1D Compatibility (HY) -14400 + (ID) 4900
Total energy: -178015.0 ( -78.21 by residue)
QMean score : 0.379
|
|
|