Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPFVKIDLFEGRSQEQKNELAREVTEVVSRIAKAPKENIHVFINDMPEGTYYPQGELKKK
4OTA Chain:R ((1-58))
-PIAQIHILEGRSDEQKETLIREVSEAISRSLDAPLTSVRVIITEMAKGHFGIGGELAS-
General information:
TITO was launched using:
RESULT:
Template:
4OTA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11516 for 307 contacts (-37.5/contact) +
2D Compatibility (PS) -6566 + (NN) -5885 + (LL) 272
1D Compatibility (HY) -4000 + (ID) 1250
Total energy: -28945.0 ( -94.28 by residue)
QMean score : 0.628
(partial model without unconserved sides chains):
PDB file :
Tito_4OTA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OTA-query.scw
PDB file :
Tito_Scwrl_4OTA.pdb
: