Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSYFRNYWYRFGAILFIILAVILLVFRPDWSMLHYLLYFNFMALLAHQFEEYQFPGGASPIINYVVYDEEELMDRFPGNTQSIMLVNTIAWLLYIASIAFPQAYWLGLGVMFFSLTQLLGHGFQMNIKLKTWYNPGLATTVFLLVPIACAYIYQASAEGMLT--WGDWLGGFIMLIVCVLTSIIAPVQLLKDKKTNYIISPWQMDRFHKVINFVRIKK |
2XF7 Chain:A ((3-50)) | ------------------------------------------------------------------------------------------------------------------------ESLLYGYFLDSWLD-GTASEELLRVAVNAGDLTQEEADKIMSYPWGAWN------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2XF7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -25890 for 299 contacts (-86.6/contact) +
2D Compatibility (PS) -4842 + (NN) -1300 + (LL) 15492
1D Compatibility (HY) -3200 + (ID) 550
Total energy: -20290.0 ( -67.86 by residue)
QMean score : 0.114
|
|
|