Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKPIVRDTFFLQQKSQMASRADVSLAKDLQDTLHANQNYCVGMAANMIGSLKRVIIINVGITN---LVMFNPVLVAKSDPYETEESCLSLVGCRS-TQRYRHITISYRDINWKEQQIKLTDFPAQICQHELDHLEGILI
4AL2 Chain:C ((33-141))
----------------------------DMFETMYAEEG--IGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLF
General information:
TITO was launched using:
RESULT:
Template:
4AL2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62018 for 739 contacts (-83.9/contact) +
2D Compatibility (PS) -10986 + (NN) 905 + (LL) 2832
1D Compatibility (HY) -6000 + (ID) 1800
Total energy: -77067.0 ( -104.29 by residue)
QMean score : 0.383
(partial model without unconserved sides chains):
PDB file :
Tito_4AL2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4AL2-query.scw
PDB file :
Tito_Scwrl_4AL2.pdb
: