Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYLTAGESHGPSLTAIIEGIPAGLKLSAKDINEDLKRRQGGYGRGNRMKIETDQVIISSGVRHGKTLGSPITLTVTNKDHSKWLDIMSVEDIEERLKQKRRIKHPRPGHADLVGGIKYRFDDLRNALERSSARETTMRVAIGAIAKRILKEIGIEIANHIVVFGGKEITVPDKLTVQQIKVLSSQSQVAIVNPSFEQEIKDYIDSVKKAGDTIGGVIETIVG------GVPVGLGSYVHWDRKLDAKIAQAVVSINAFKGVEFGLGFKSGFLKGSQVMDSISWTKDQGYIRQSNNLGGFEGGMTNGEPIIVRGVMKPIPTLYKPLMSVDIDTHEPYRATVERSDPTALPAAGVVMEAVVATVLVTEVLEKFSSDNMYELKEAVKLYRNYVNHF |
| 1UM0 Chain:A ((8-357)) | LRLTTFGESHGDVIGGVLDGMPSGIKIDYALLENEMKRRQGGRNVFITPRKEDDKVEITSGVFEDFSTGTPIGFLIHNQR---A-----RSKDY-----DNIKNLFRPSHADFTYFHKYGIRDFR-GGGRSSARESAIRVAAGAFAKMLLREIGIVCESGIIEIGGIKAKNYDF-------NHALKSEIFALDEEQEEAQKTAIQNAIKNHDSIGGVALIRARSIKTNQKLPIGLGQG--LYAKLDAKIAEAMMGLNGVKAVEIGKGVESSLLKGSEYNDLMDQK-----GFLSNRSGGVLGGMSNGEEIIVRVHFKPTPSIFQPQRTIDINGNECECLLKGRHDPCIAIRGSVVCESLLALVLADMVLLNLTSKIEYLKTIYNEN-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UM0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114925 for 2782 contacts (-41.3/contact) +
2D Compatibility (PS) -37301 + (NN) -16995 + (LL) 3264
1D Compatibility (HY) -12800 + (ID) 6350
Total energy: -185107.0 ( -66.54 by residue)
QMean score : 0.427
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