Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MINNVVLVGRMTRDAELRYTPSNQAVATFSLAVNRNFKNQ-SGE--READFINCVIWRQQAENLANWAKKGALVGITGRIQTRNYENQQGQRVYVTEVVAESFQLLESRATREGGSPNSYNNGGYNNAPSNNSYSASSQQTPNFSRDESPFGNSNPMDISDDDLPF
3TQY Chain:A ((7-113))
GVNKVILIGNLGQDPEVRYTPNGNAVANVTLATSTTWRDKQTGELQERTEWHRIAFFNRLAEIVGEYLRKGSKIYIEGSLRTRKWQDKNGVDRYTTEIIANEMHMLD-----------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3TQY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49465 for 602 contacts (-82.2/contact) +
2D Compatibility (PS) -11317 + (NN) -4701 + (LL) -384
1D Compatibility (HY) -6400 + (ID) 1500
Total energy: -73767.0 ( -122.54 by residue)
QMean score : 0.725
(partial model without unconserved sides chains):
PDB file :
Tito_3TQY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TQY-query.scw
PDB file :
Tito_Scwrl_3TQY.pdb
: