Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEILVLGAGYAGLKAVRNLQKQSGDFHITLVDMNDYHYEA-TELHEVAAGSQPKEKITFPIKDVINTNKVNFMQD-EVLKVDAENKTVTVKNNGELHYDYVVVALGFVSET-FGIKGAMENALQMTNISQAENIHNHIVNTMKLYRETKDENLLKLLVCGAGFTGIELAGAMVDERPKYAALAGVKPEQIEIICVEAATRILPM-FDDELAQYGVNLIKDLGINLMLGSMIKEIKPGEVVYGTSKEDEELKSITAGTIIWTTGVSGSPVMGE-SGFDQRRGRVMVNSDLRDPKYDNVYVIGDVSAFMDTESGR-PFPTTAQIATRMGAHVAKNLLHQIKGEATEDFSYSPQGTVASVGNTHGLGVVGKTKIKKYPASVMKKIIMNKSLVDMGGLKELLAKGRFDLYH |
| 2GQW Chain:A ((7-308)) | KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRLD---CKRAPEVEWLLGVTAQSFDPQAHTVALSDGRTLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGL------------RPQSRLLIVGGGVIGLELAATARTA-------------GVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSV-DGVVLLDD--G---TRIAADMVVVGIGVLANDALARAAGLA-CDDGIFVDAYGRT-TCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDPTAPGYAELPWYWSDQGALRIQVAGLASGDEEIVRGEVSLDAPKFTLIELQKGRIVGATCVNNARDFAPLR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GQW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -235982 for 2446 contacts (-96.5/contact) +
2D Compatibility (PS) -32167 + (NN) -14100 + (LL) 2304
1D Compatibility (HY) -14000 + (ID) 3300
Total energy: -297245.0 ( -121.52 by residue)
QMean score : 0.455
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