Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYIQNLELTSYRNY-DHAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKELIRWDKDYAKIEGRVMKQNGAIPMQLVISKKGKKGKVNHIEQQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSPVYLHDLSLYQKILSQRNHFLKQLQTRKQTDRTMLDVLTDQLVEVAAKVVVKRLQFTAQLEKWAQPIHAGISRGLEELTLKYHTALDVSDPLDLSKIGDSYQEAFSKLREKEIERGVTLSGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLSELDDYRQSHLLHTIQGRV--QTFVTTTSVDGIDHETLRQAGMFRVQNGALVK---- |
| 1E69 Chain:A ((1-1164)) | MRLKKLYLKGFKSFGRPSLIGFSDRVTAIVGPNGSGKSNIIDAIKWV-FGEKFDMIFAGSENLPPAGSAYVELVFEENGEEITVARELKRTGENTYYLNGSPVRLKDIRDRFAGTGLGVDFYSIVG-----------------------------------QGQIDRIVNAYQRVNESFNRFISLLFFGG----------EGRLEISIRK-----------------------------------------------------PGRRDQKLSLL----------SGGEKALVGLALLFALM-----EIKPSPFYVLDEVDSPLDDYNAERFKRLLKENSKHTQFIVITHNKIVMEAADLLHGVTMVNGVSAIVPVEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E69.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63696 for 1999 contacts (-31.9/contact) +
2D Compatibility (PS) -26519 + (NN) 2916 + (LL) 8268
1D Compatibility (HY) -12800 + (ID) 2200
Total energy: -94031.0 ( -47.04 by residue)
QMean score : 0.344
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