Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MTYHEWKDLALFYSV-ESTQK-------FLEKVYILNGINDAKKNSFKNSERFI--YFLKH--------AESFYKQAAYSPLEIKPILLFYGMAQL-----IKACLITRDPHYPSHTSVLAHG--VTTRKRKKQNYCFSDDEVKIQRNGLCVHFMKHLFGQSDIVDERYTMKKLLMAIPELSDIFYFQQKERFMTKVEKDKNEIFVPEEVVINYKMSDSRFAEYMSHHY-QWSFTKKNEHGLLFEISPQDKEPWTSTSLLFDMEKNQYYIPSQREQFLRLPEMTIHYLILYNVGMIARYETEWWYELLTQHISDDYVLIQQFLLVSEKKFPKYASQFLLHF |
| 4LK4 Chain:A ((32-372)) | RIINGSNANSAEWPSIVALVKRGADAYQGQFCGGSFLGGRYVLTAAHCFDSRSAASVDVIIGAYDLNNSSQGERIAAQKIYRHLSYSPSNLLNDIAIVELAQTSSLPAITLAGPATRTSLPALTPLTVAGWGITFTPI------LQEVDVDLVSQSLCQIVMQHGIS-SDPNSTNFCAARLTQG-DAGGPIVVKTGREQLGIVSWGDEQGTY---GVYTNV----SYFRDWITKHTNQLSYDQVANLG----IRPLGKVSQSFTYTNLDANALTYTGNTFSSLPADFSVLSDGCSTKVTLATGESCSVEVAVDAQH---YRQYQYDFELIFSYAGGSKRATSRIQLDT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LK4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105188 for 2292 contacts (-45.9/contact) +
2D Compatibility (PS) -29213 + (NN) 12335 + (LL) 1920
1D Compatibility (HY) -4800 + (ID) 2550
Total energy: -127496.0 ( -55.63 by residue)
QMean score : 0.138
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