Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRRQMSFNGKSDMGILYLVPTPIGNLEDMTFRAIDTLKSVDAIAAEDTRQT--------KKLCHVYEIETPLVSYHEHNKES------------SGHKIIEWLKSGKNIALVSDAGLPTISDPGAEIVKDFTD---IGGYVVPLPGANAALTALIASGIVPQPF--FFYGFLNRQKKEKKKELEALKKRQETIIFYEAPHRLKETLSAMAEILGDREIAVTRELTKKYEEFIRGTISEVIGWANEDQIRGEFCLVVEGSNNEEVDEEEQWWETLTAKEHVEHYISKGATSKEAIKKAAVDRNVPKREVYDAYHIKQ |
| 2NPN Chain:A ((2-227)) | -------------MRTIYVIGIGTGSPEFLTLQAISGLRHAQAIVALD---QKSDLLALRQKIVDTHAPGTPIYAVTD---EEEVRRWHAERAHLLASTIRERTPDDGAVAFL-VWGDPSLYDSTLRIIEHMRNLEDLHADVKVIPGITAVQVLTAEHGILINRIGEAIHITTGRNL-P----ETSA-KDRRNCVVMLDGKT---AWQDVATE-H-TYMWWGAFLGTEQQVLRKGYVHEIGAQV------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NPN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89948 for 1342 contacts (-67.0/contact) +
2D Compatibility (PS) -19569 + (NN) -6834 + (LL) 7400
1D Compatibility (HY) -6000 + (ID) 1750
Total energy: -116701.0 ( -86.96 by residue)
QMean score : 0.404
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