Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLFDTHAHLNAEQYDTDLEEVIERAKAEKVERIVVVGFDRPTITRAMEMIEEY----DFIYAAIGWHPVDAIDMTEEDLAWIKELSAHEKVVAIGEMGLDYHWDKSPKDIQKEVFRNQIALAKEVNLPIIIHNRDATEDVVTILKEEGAEA-VG-GIMHCFTGSAEVARECMKMNFYLSFGGPVTFKN-AKKPKEVVKEIPNDRLLIETDCPFLTPHPFRGK----RNEPSYVKYVAEQIAELKEMTFEEIASITTENAKRLFRIN
3RCM Chain:A ((2-273))
QLIDIGVNLTNSSFHDQQAAIVERALEAGVTQMLLTGTSLAVSEQALELCQQLDASGAHLFATAGVHPHDAKAWDTDSERQLRLLLSEPRVRAVGECGLDFNRDFSPRPLQEKALEAQLTLAAQLRLPVFLHERDASERLLAILKDYR--DHLTGAVVHCFTGEREALFAYLDLDLHIGITGWICDERRGTHLHPLVGNIPEGRLMLESDAPYLLPRSLRPKPKSGRNEPAFLPEVLREVALHRGESAEHTAAHTTATARDFFQLP
General information:
TITO was launched using:
RESULT:
Template:
3RCM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -165971 for 2235 contacts (-74.3/contact) +
2D Compatibility (PS) -27661 + (NN) -15023 + (LL) 248
1D Compatibility (HY) -16800 + (ID) 3600
Total energy: -228807.0 ( -102.37 by residue)
QMean score : 0.639
(partial model without unconserved sides chains):
PDB file :
Tito_3RCM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RCM-query.scw
PDB file :
Tito_Scwrl_3RCM.pdb
: