Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIKEIIVVEGRDDTARIKLAVD--ADTIETNGSAI------------------------DDHVIDQIRLAQKTRGVIILTDPDFPGEKIRKTISEAVPGCKHAFLPKHLAKPKNKRGIGVEHASVESIRACLENVHEEMEAQPSDISAEDLIHAGLIGGPAAKCRRERLGDLLKIGYTNGKQLQKRLQMFQIKKSDFMSALDTVMREEQNE |
2GAI Chain:A ((7-142)) | ----KYIVVESPAKAKTIKSILGNEYEVFASMGHIIDLPKSKFGVDLEKDFEPEFAVIKGKEKVVEKLKDLAKKGELLIASDMDREGEAIAWHIARVTNTL----GRK--NR------IVFSEITPRVIREAVKNPRE-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GAI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50150 for 700 contacts (-71.6/contact) +
2D Compatibility (PS) -10818 + (NN) -5689 + (LL) 6224
1D Compatibility (HY) -4800 + (ID) 1150
Total energy: -66383.0 ( -94.83 by residue)
QMean score : 0.565
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