Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDDSIGVKRHWIWQGAFVLILA---GVITKILSAVYRVPFQNIVGDVGFY-IYQQVYPFLG---IAVMLSTSGFPVIISKLMNDYSEKNHHTILKI---------SALFLSLIGILLFLCLYLGAVPIALFMGDSHLAVLIQVAAYAFLLFPFVALLRGGF-QGRHEMLPSALSQMTEQFLRVAVLLGLSFWLVKKGASLYTAGAAAASGS-----LAGSLV-----ALIILGFFWFKTKRDNQTDRQNENVITTKELTKKLLLYSV----TICVSSLLLLFIQLVDA---LNLYALLSGGEASEEAKCL--KGIYDRGQPLLQLGSVFAVSIATSLV--PYISMAV-------KNKELKIMKEKITS----SLKLCLVLGTGA---------------------------SAGLICILKPVNIMLFQNGEGTGALQVFSCSILFASLAVTAAAVLQGAGYTVFPAIAVGAGVAVKWVLNTLLVP--RYGIEGAS----LATAASFAAVAGL-----------NLYQLRQKEWLDKLRG--VLIPIIGSALLMSAVLLAYTRLWTFLFPATGRGAAVIESLSAVAIGGA-VFIYCMMRLGIFTDEELNSVPFGSKLSKFMRRREQNGG |
| 4CGY Chain:A ((22-640)) | --FSRAAMEMALRGVRKVLCVAEKNDAAKGIADLLSNGRMRRREGLSKFNKIYEFDYHLYGQNVTMVMTSVSGH-LLAHDFQMQFRKWQSCNPLVLFEAEIEKYCPENFVDIKKTLERETRQCQALVIWTDCDREGENIGFEIIHVCKAVKPNLQVLRARFSEITPHAVRTACENLTEPDQRVSDAVDVRQELDLRIGAAFTRFQTLRLQRIFPEVLAEQLISYGSCQFPTLGFVVERFKAIQAFVPEIFHRIKVTHDHKDGIVEFNWKRHRLFNHTACLVLYQLCVEDPMATVVEVRSKPKSKWRPQALDTVELEKLASRKLRINAKETMRIAEKLYTQGYISYPRTETNIFPRDLNLTVLVEQQTPDPRWGAFAQSILERGGPTPRNGNKSDQAHPPIHPTKYTNNLQGDEQRLYEFIVRHFLACCSQDAQGQETTVEIDIAQERFVAHGLMILARNYLDVYPYDHWSDKILPVYEQGSHFQPSTVEMVDGETSPPKLLTEADLIALMEKHGIGTDATHAEHIETIKARMYVGLTPDKRFLPGHLGMGLVEGYDSMGYEM------SKPDLRAELEADLKLICDGKKDKFVVLRQQVQKYKQVFIEAVAKAKKLDEALAQYFGNGT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CGY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -436685 for 3840 contacts (-113.7/contact) +
2D Compatibility (PS) -54443 + (NN) -7088 + (LL) 816
1D Compatibility (HY) -12400 + (ID) 4100
Total energy: -513900.0 ( -133.83 by residue)
QMean score : 0.247
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