Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGKITVVGLGAGDMDQLTIGIHKLLTKADTLYVRTKDHPLIEELEKETKNIRFFDDIYEKHDQFEAVYEEIADILFEAA-RREDVVYAVPGHPFVAEKTVQLLTERQEKENVQVKVAGGQSFLDATFNVLQIDPIE-----GFQFV-DAGTL----SADELELRHHLIICQVYDQMTASEVKLTLMEK-LPDDYEVVIVTAAGSRGEEIRTVPLFELDRNV-ALNNLTSVYIPPIKEEKLLYHEFSTFRSIIRELRGPNGCPWDKKQTHQSLKQYMIEECYELLEAIDEEDTDHMIEELGDVLLQVLLHAQIGEDEGYFTIDDVIKGISEKMVRRHPHVFKDVKVQDENDVLANWEDIKKAEKNTSESSLLDSVPKTLPALSKAAKLQKKAAKVGFDWEDVSDIWEKVSEEMKEFSSEVSEAPHEHNLKAEFGDILFALVNVARFYKIEPEEALTMTNDKFRRRFSYIEETAKEEGVELADMSLEDMDKLWNEAKETERRS |
| 1PJQ Chain:A ((214-446)) | HRGEVVLVGAGPGDAGLLTLKGLQQIQQADIVVYDRLVSDDIMNLVRRDADRVFVGK---R---HCVPQEEINQILLREAQKGKRVVRLKGGDPFIFG-RGGEELETLCHAGIPFSVVPGITAASGCSAYSGIPLTHRDYAQSVRLVT-----GELDWENLAAEKQTLVFYMGLN--QAATIQEKLIAFGMQADMPVALVENGTSVKQRVVHGVLTQLGELAQQVESPALIIVGRVVA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PJQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129401 for 1744 contacts (-74.2/contact) +
2D Compatibility (PS) -22583 + (NN) -6907 + (LL) 21184
1D Compatibility (HY) -8400 + (ID) 1900
Total energy: -148007.0 ( -84.87 by residue)
QMean score : 0.427
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