Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAQRRPAGKKIPFQKDSFLQQFEKLAQSRKHHVLLESA--RGGRYSIAGLDPIATVKGKDGITTIKHGDEMLFKEGDPLRAFHSWFKTLETETNHEFP-DFQGGAIGFLSYDYARY-IENFKMLSLDDLETPDIYFLVFDDIAVYDHQEESLWLITHVNGSDQETADVKLSELEQMWLTELPAVTSREMKPETAGSFAAPFTEDGFSQAVEKIKQYIASGDVFQVNLSIRQSQSLS--VHPYQIYKTLREVNPSPYMAYLETPDFQIICGSPELLVSKKGKLLETRPIAGTRSRGKTNEEDEALANELIHNEKERAEHVMLVDLERNDLGRVSRYGSVRVNEFMAIEKYSHVMHIVSNVQGELQDGYDAVDIIHAVFPGGTITGAPKVRTMEIIEELEPTRRGLYTGSIGWFGYNHDLQFNIVIRTIYATGGQAFMQSGAGVVIDSVPKHEYKESFKKAFAMQRALELSEEETKIR |
4GRH Chain:A ((27-454)) | ---------------------------PARFPLLMESTAS-QGRWSLLLVAQGDGLRLDADGQ-VRDQ-HDLVQPGTFLQALDRAWQHERLSHDGSHSLPFRGGWALMLDYEVASQIEPVLPA-RARGDGRPTALALRCPAAVLHDHHNEASFVIAEAGEQ------ALLDALVALASAALPE----AGQGWQPPQAVGEDAPQRFTDGVRRVIEYLRAGDVFQVNLSRRWNAQFAAPVSPQALYAQLRRANPAPFAGLFSAHGRHVVSSSPERLVSVHAGHAQTRPIAGTRPRFEGD-D-------------ERAEHVMLIDLERNDLGRICLPGTVVVDELMTVESYAHVHHIVSNVSGHLRPEVTPGEVIAATFPGGTITGCPKVRCMQIISELEQVPRGAYTGAFGWLNRDGDLDLNILIRTAEVDGHEVSFRTGAGIVVDSDPDKELDETRAKARGLLRALG--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GRH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150767 for 3489 contacts (-43.2/contact) +
2D Compatibility (PS) -43618 + (NN) -17365 + (LL) 5044
1D Compatibility (HY) -20000 + (ID) 7250
Total energy: -233956.0 ( -67.06 by residue)
QMean score : 0.471
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