Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDILLVDGYNMIGAW-PQLKDLKANSFEEARDVLIQKMAEYQSYTGNRVIVVFDAHLVKGLE----------------------K-----KQTNHRVEVIFTKENETADERIEKLAQALNNIATQIHVATSDYTEQWAIFGQGALRKSARELLREVETIERRIERRVRKITSEKPAGKIALSEEVLKTFEKWRRGDLD
4Q0W Chain:A ((24-199))
-KRMAVDASIWIYQFLKAVRDQ-NAVKNSHITGFFRRICKLLYF-GIRPVFVFDGGVPVLKRETIRQRKERRQGKREDEVTMDMIKEVQELLSRFGIPYITAP--MEAEAQCAELLQL----NLVDGIITDDSDVFLFG-----------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4Q0W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15632 for 705 contacts (-22.2/contact) +
2D Compatibility (PS) -11501 + (NN) -8213 + (LL) 5544
1D Compatibility (HY) -4000 + (ID) 750
Total energy: -34552.0 ( -49.01 by residue)
QMean score : 0.419
(partial model without unconserved sides chains):
PDB file :
Tito_4Q0W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4Q0W-query.scw
PDB file :
Tito_Scwrl_4Q0W.pdb
: