Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNLQNNKGKFNKEQFCQLEDEQVIEKVHVGDSD-ALDYLITKYRNFVRAKARSYFLIGADREDIVQEGMIGLYKSIRDFKEDKLTSFKAFAELCITRQIITAIKTATRQKHIPLNSYASLDKPIFDEESDRTLLDVISGAKTLNPEEMIINQEEFDDIEMKMGELLSDLERKVLVLYLDGRSYQEISDELNRHVKSIDNALQRVKRKLEKYLEIREISL |
4X8K Chain:A ((52-121)) | ------------------------------DGDRAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWI-RQAIT---------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4X8K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -36154 for 433 contacts (-83.5/contact) +
2D Compatibility (PS) -7179 + (NN) -1093 + (LL) 11488
1D Compatibility (HY) -3600 + (ID) 1150
Total energy: -37688.0 ( -87.04 by residue)
QMean score : 0.601
|
|
|