Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLLPKRVKYRREHRGKMRGRAKGGTEVHFGEFGIQALEASWITNRQIEAARIAMTRYMKR-----GGKVWIKIFPSKPYTAKPLEVRMGSGKGAPEGWVAVVKPGKVLFEISGV--SEEVAREALRLASHKLPIKTKFVKREEIGGESNES
2PA2 Chain:A ((18-140))
------------------------------CGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPF--------------------GTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKW-------
General information:
TITO was launched using:
RESULT:
Template:
2PA2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55981 for 640 contacts (-87.5/contact) +
2D Compatibility (PS) -10011 + (NN) -5771 + (LL) 1996
1D Compatibility (HY) -2400 + (ID) 1300
Total energy: -73467.0 ( -114.79 by residue)
QMean score : 0.610
(partial model without unconserved sides chains):
PDB file :
Tito_2PA2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PA2-query.scw
PDB file :
Tito_Scwrl_2PA2.pdb
: