Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MIGQKAWVNIGKTEFILLLVVGILTIINVLTADGEKRTFHSPKKKNINHLTLYDCVSPEVQNSINETGRVTNFF
1Q90 Chain:L ((1-32))
MLTITSYVGLLIGALVFTLGIYLGLLKVVKLI--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1Q90.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12071 for 129 contacts (-93.6/contact) +
2D Compatibility (PS) -2974 + (NN) -485 + (LL) 2000
1D Compatibility (HY) -4000 + (ID) 350
Total energy: -17880.0 ( -138.60 by residue)
QMean score : 0.044
(partial model without unconserved sides chains):
PDB file :
Tito_1Q90.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q90-query.scw
PDB file :
Tito_Scwrl_1Q90.pdb
: