Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDKFLNNRWAVKIIALLFALLLYVAVNSNQAPTPKKPGESFFPTSTTDEATLTDIPVKAYYDDENYVVTGVPQTVNVTIKGSTSAVKKARQTKNFEIYADMEHLKTGTHKVELKAKNVSDGLTISINPSVTTVTIQERTTKSFPVEVEYYNKSKMKKGYSPEQPIVSPKNVQITGSKNVIDNISLVKASVNLENADETIEKEAKVTVYDKDGNALPVDVEPSVIKITVPVTSPSKKVPFKIERTGSLPDGVSIANIESSPSEVTVYGSQDVLDSLEFIDGVSLDLSKINKDSDIEADIPLPDGVKKISPSKVTLHIEVDSEADQKFENVPIKTVGLSSSQNI-EFLDPESQAIDVTAKG-SPTNINKLKKSDIELYVNVSDLEDGEHSVKLE-VNGPQNVTWSLGRKNAKIKLTSKKSNTSTNDNSSNTSGNQDTDKQTNDQKNNQQEDTKNTDKNNNDQNQDGNKDQNQDQDEDESTANSQSSSE
5DM6 Chain:S ((95-170))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SVPVHTTGRSQGEVQGGLVDI--VVHNLQIVAPGPRRI---P-Q--ELVVDVTKMNIGD-HITAGDIKLPEGCTLAADPELTVVS--------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5DM6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4513 for 451 contacts (10.0/contact) +
2D Compatibility (PS) -7842 + (NN) -4089 + (LL) 19832
1D Compatibility (HY) -4000 + (ID) 750
Total energy: 7664.0 ( 16.99 by residue)
QMean score : 0.465

(partial model without unconserved sides chains):
PDB file : Tito_5DM6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5DM6-query.scw
PDB file : Tito_Scwrl_5DM6.pdb: