Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDKFLNNRWAVKIIALLFALLLYVAVNSNQAPTPKKPGESFFPTSTTDEATLTDIPVKAYYDDENYVVTGVPQTVNVTIKGSTSAVKKARQTKNFEIYADMEHLKTGTHKVELKAKNVSDGLTISINPSVTTVTIQERTTKSFPVEVEYYNKSKMKKGYSPEQPIVSPKNVQITGSKNVIDNISLVKASVNLENADETIEKEAKVTVYDKDGNALPVDVEPSVIKITVPVTSPSKKVPFKIERTGSLPDGVSIANIESSPSEVTVYGSQDVLDSLEFIDGVSLDLSKINKDSDIEADIPLPDGVKKISPSKVTLHIEVDSEADQKFENVPIKTVGLSSSQNI-EFLDPESQAIDVTAKG-SPTNINKLKKSDIELYVNVSDLEDGEHSVKLE-VNGPQNVTWSLGRKNAKIKLTSKKSNTSTNDNSSNTSGNQDTDKQTNDQKNNQQEDTKNTDKNNNDQNQDGNKDQNQDQDEDESTANSQSSSE |
5DM6 Chain:S ((95-170)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SVPVHTTGRSQGEVQGGLVDI--VVHNLQIVAPGPRRI---P-Q--ELVVDVTKMNIGD-HITAGDIKLPEGCTLAADPELTVVS-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5DM6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4513 for 451 contacts (10.0/contact) +
2D Compatibility (PS) -7842 + (NN) -4089 + (LL) 19832
1D Compatibility (HY) -4000 + (ID) 750
Total energy: 7664.0 ( 16.99 by residue)
QMean score : 0.465
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