Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEPIEVFKALSNESRLQILQWLKEPDRHFAPHEGIDMNTIGVCVSQITDKLKMTQSTASQYLTILLRAGLIKAERIGKYTYYKRDEEAIGKLADFLKTEI
4OMZ Chain:A ((19-96))
--AAGFLSAMANPKRLLILDSLVK---------------EEMAVGALANKVGLSQSALSQHLSKLRAQNLVSTRRDAQTIYYSSSSDSVMKILGA-----
General information:
TITO was launched using:
RESULT:
Template:
4OMZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44366 for 528 contacts (-84.0/contact) +
2D Compatibility (PS) -8416 + (NN) -2882 + (LL) 1260
1D Compatibility (HY) -4000 + (ID) 1000
Total energy: -59404.0 ( -112.51 by residue)
QMean score : 0.530
(partial model without unconserved sides chains):
PDB file :
Tito_4OMZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OMZ-query.scw
PDB file :
Tito_Scwrl_4OMZ.pdb
: