Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MRFLKALPRRAEVQY-DCLDRTLETQENVNLNIRVNVKEVATWGVNTCIISLKG-LDNADDRFVLPEVNTALALF-PLSIAAD-CLLMLPCISVVMSISSVMKSVTVE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 3VWA Chain:A ((5-544)) | PLHMSISNFQFPYTIEETAITETALWQCFDGTRKADSLPVTVFKAKRSPENESLILNAVHKSKILKIPGLCTVLETFDSDPQSTFIVTERVVPFPWDNLGSLSQNKFGVELGISQLLATLGFLKNFVLGTLSKDSVFINIKGEWVLFGLELCSSKEGLSAFEFASRARSYYNIIGSQLPCEDPNTIDSMGLGLLIKSLMAPSCLPKDWIVNVNMISDGKITIENFRKRLENTETWRSNPLINFYQELRELHIKDPQGKLVVMSNLENLYLESREIFRNLT------------------PGMIEN----FIIPELCEIIKLLMTQSISSNASHKLVPFLAIVLDLTSETNTFPVGFNDLITQSFKLPDRQVRFLLLIYLPKLIGPLSKSEISSRIYPHFIQGLTDSDATLRLQTLKTIPCIVSCLTERQLNNELLRFLAKTQVDSDVEIRTWTVIIISKISTILSTSVGNRSNILATAFTKSLKDPQVKPRLAALYGLEKSIELFDVNTIANKILTVIAPGLLDKSPIVRGRAKILFEEYLEKLEKEAQLIQTN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8166 for 452 contacts (-18.1/contact) +
2D Compatibility (PS) -8025 + (NN) 2331 + (LL) 1712
1D Compatibility (HY) 4400 + (ID) 200
Total energy: -7948.0 ( -17.58 by residue)
QMean score : 0.109
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