Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRNQKEWESVSKKGLMKPGGTSIVKAAGCMGCWASKSIAMTRVCALPHPAMRAI
1XV3 Chain:A ((1-47))
-------HSSGYTRPLRKPSRPIFIRPIGCDVCY-GIPSSTARLCCFRYGDCCHL
General information:
TITO was launched using:
RESULT:
Template:
1XV3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12851 for 216 contacts (-59.5/contact) +
2D Compatibility (PS) -4772 + (NN) 294 + (LL) 724
1D Compatibility (HY) -2000 + (ID) 450
Total energy: -19055.0 ( -88.22 by residue)
QMean score : 0.244
(partial model without unconserved sides chains):
PDB file :
Tito_1XV3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XV3-query.scw
PDB file :
Tito_Scwrl_1XV3.pdb
: