Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTLWKVLKIVFVSLAALVLLVSVSVFIYHHFQLNKEAALLKGKGTVVDVDGKKMNVYQEGS-GKDTFVFMSGSGIAAPAYEMKGLYSKFSKENKIAVVDRAGYGYSEVSH-DDRDIDTVLEQTRKALMKSGNKPPYILMPHSISGIEAMYWAQKYPKEIKAIIAMDIGLPQQYVTYKLSGVDRLKVRGFHLLTSIGFHRFIPSAVYNPEVIRQSFLTDEEKEIYKAINFKQFFNADMEHELLQSYQNGSKSVNLPAPKETPVLILDAVSDQNRHSKYAIQNRKDYEAFAAQFNTADI-KELRGTHSIYLYQPDQIYKLSMEFMRKVR |
| 4CCY Chain:A ((32-293)) | ------------------------------------------SEAFYVSTRFGKTHIIASGPKDAPSLILLHGGLFSS--AMWYPNIAAWSSQFRTYAVDIIGDKNKSIPSAAMETRADFAEWMKDVFDSLGLE-TAHLAGLSLGGSHIVNFLLRAPERVERAVVISPAEAFISFHPDV------YKYAAELTGARGAESYIKWIT-----GDSYDLHPLLQRQIVAGVEWQDEQRS-LKPTENGFPYVFTDQELKS-IQVPVLLMFGEHEAMY-----HQQMAF-ERASVLVPGIQAEIVKNAGHLLSLEQPEYVNQRVLSFLCG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CCY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30393 for 2262 contacts (-13.4/contact) +
2D Compatibility (PS) -27137 + (NN) -1411 + (LL) 6276
1D Compatibility (HY) 1600 + (ID) 1550
Total energy: -52615.0 ( -23.26 by residue)
QMean score : 0.420
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