Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANKELKRGLGARHIQMIALGGTIGVGLFMGSASTISWTGPSVLLAYAICGIFIFFIMRAMGEMLYVEPSTGSFATFGHQYIHPMAGYITAWSNWFQWIIVGMSEIIAVGSYTKYWFPDLPAWIPGIVAMVILGAANLISVKSFGEFEFWFAMIKIVTIILMIIAGIGIIFFGFGNGGDAIGLSNLWSHGGFFAGGFSGFFFALSLVIAAYQGVELIGITAGEAKDPQNTLRNAIQSIIWRILIFYIGAIFVIVTVYPWDELNSLGSPFVSTFSKI-GITAAAGIINFVVITAAMSGCNSGIFSAGRMLYTLGVNGQ----APKFFKKISRNGVPLYGTIAVLIGLAVGVVLNYIAPPKIFVYVYSASVLPGMIPWFIILISHIGFRKAKGAALDKHPFKM---PFAPFTNYLTIAFLLMVLVGMWFNDDTRISLIVGVIF-----LALVVISYYVFGIGKRTQANLTKSEQAAE |
| 4QPP Chain:A ((48-376)) | YYECYSDVSVHEEMIADRVRTDAYRLGILRNWAAL---RGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA---------IWQQAREVVRFNGLEDRVHVLPGPVETV---------ELPEQVDAIVSE--------------------------------------------------------WMGYGLLHESM------LSSVLHARTKW-----------------------LKEGGLLLPASAELFIVPIS--DQMLEWRLGFWSQVKQHYGVDM-----------SCLEGFATRCLMGHSEIVVQGLSGEDVLARPQRFAQLELSRAGLEQELEAGVG------------GRFRCSCYGSAPMHGFAIWFQVTFP---------GGESEKPLVLSTSPFHPATHWKQALLYLNEPVQV--EQDTDVSGEITLLPSRDNPRRLRVLLRYKVGDQEEKTKDFAMED---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QPP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -394771 for 2527 contacts (-156.2/contact) +
2D Compatibility (PS) -33900 + (NN) -1864 + (LL) 10920
1D Compatibility (HY) -12400 + (ID) 2950
Total energy: -434965.0 ( -172.13 by residue)
QMean score : 0.205
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