Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------MGAIERSGYTFQPEFSVVRQ--NGAIHVYHQGEFVEEIEFEFNG---EYPDHDLIEELVN----HYCFEHEI-----
2KSS Chain:A ((21-106))
MIQDPSLIICHDVDGAPVRIGAKVKVVPHSEDGTISQRFLGQTGIVVGLVFDDPATQYPDDPLIQVLVEGLGEDLFFPEELELAPE
General information:
TITO was launched using:
RESULT:
Template:
2KSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9756 for 387 contacts (-25.2/contact) +
2D Compatibility (PS) -6488 + (NN) 1968 + (LL) 0
1D Compatibility (HY) -6400 + (ID) 750
Total energy: -21426.0 ( -55.36 by residue)
QMean score : 0.203
(partial model without unconserved sides chains):
PDB file :
Tito_2KSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KSS-query.scw
PDB file :
Tito_Scwrl_2KSS.pdb
: