Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMITLFQCLYLILFSFICYQGAAAFSHSTAASWLAAALGAAAAGLYIWNTKRVWKHCSSGLCAWIAVIQVMSVGVVLIGTDIMPVLCVIAIFAGCEGLRIGQSALQARLSDQIDKLTQAEQHANQMLIDVRSRNHDTMKHITAIKSA--------QP-----KADTQAYIQNWADQYSQYDRFLKG-----------------ENAYVAGVLYDFLEKARASNV---SVSL-----HMHTPLSSLPFSPADQVSLVGNILENALDSAAEARE----KAEIKLETSLRSGLYVLTCENSTPGMDPKVLDTIYQSFGRSTKN-----------GAHEGMGTYIIQKLVKGAFGRLDFTYRHP-IFRLEIKIPFQK
2Q8G Chain:A ((105-366))---------------------------------------------------------------------------------------------------------------------------AIYDFTDTVIRIRNRHNDVIPTMAQGVIEYKESFDPVTSQNVQYFLDRFYMSRISIRMLLNQHSLLFGKHIGSINPNCNVLEVIKDGYENARRLCDLYYINSPELELEELNAKSPGQPIQVVYVPSHLYHMVFELFKNAMRATMEHHANRGVYPPIQVHVTLGNEDLTVKMSDRGGGVPLRKIDRLFN-YMYSTAPRPRVETSRAVPLAGFGYGLPISRLYAQYFQGDLKLYSLEGYGTDAVIYIKAL-


General information:
TITO was launched using:
RESULT:

Template: 2Q8G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 796 -93092 -116.95 -482.34
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -116.95
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.452

(partial model without unconserved sides chains):
PDB file : Tito_2Q8G.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2Q8G-query.scw
PDB file : Tito_Scwrl_2Q8G.pdb: