Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-MAVNFYDVAYDLENALRGSEEFTRLKNLYDEVNADESAKRMFENFRDVQLRLQQKQMAGEEITQEEVTQAQKTVALVQQHEKISQLMEAEQRMSMLIGELNKIIMKPLEELYGSVEG
4OM3 Chain:A ((10-126))KFTIPESLDRIKEEFQFLQAQYHSLKLECEKLASEKTEMQRHYVMYYEMSYGLNIEMHKQTEIAKRLNTICAQVIPFLSQEHQQQVAQAVERAKQVTMAELNAIIGQQQLQAQHLSH-


General information:
TITO was launched using:
RESULT:

Template: 4OM3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 56 -6121 -109.29 -52.76
target 2D structure prediction score : 0.78
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -109.29
2D Compatibility (Sec. Struct. Predict.) : 0.78
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.390

(partial model without unconserved sides chains):
PDB file : Tito_4OM3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4OM3-query.scw
PDB file : Tito_Scwrl_4OM3.pdb: