Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLLSKKSEYKTLSTVEHPQYIVFCDFDETYFPHTIDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESILDKMGRGKFRYFPHFIASDLGTEITYFSEHNFGQQDNKWNSRINEGFSKEKVEKLVKQLHENHNIL--LNP-Q---TQLGK----------SRYKH--NF--YYQE--QDEIN------DKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQEAKNLHNLITDSEYSKGITNTLKKLIGS
3L7Y Chain:A ((36-302))-----------------SVKVIATDMDGTFLNSKGSY----DHNRFQRILKQLQ-ERDIRFVVASSNPYRQLREHFPDCHE---QLTFVGENGANIISKN--QSLIEV---------FQQREDIASIIYFIE-EKYPQAVIALSGEKKGYLKKGVSENIVKMLSPFFPVLELVNSFSPLP-ERFFKLTLQVKEEESAQIMKAIADYKTSQRL------VGTASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDESGVLDVIDNYLAS


General information:
TITO was launched using:
RESULT:

Template: 3L7Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1268 -84194 -66.40 -353.75
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -66.40
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.437

(partial model without unconserved sides chains):
PDB file : Tito_3L7Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3L7Y-query.scw
PDB file : Tito_Scwrl_3L7Y.pdb: