Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIVRIETFPLFHRLEKPYGDANGFKRYRTCYLIRIITESGIDGWGECVDW--LP-------ALHVGFTKRIIPFLLGKQAGSRLSLVRTI---QKWHQRAASAVSMALTEIAAKAADCSVCELWGGRYREEIPVYASFQSYSDSPQWISRSVSNVEA-QLKKGFEQIKVKIGGTSF-KEDVRHINALQHTAGSSITMILDANQSYDAAAAFKWERYFSEWTNIGWLEEPLPFDQPQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQRCLDIIQPDVMHVNGIDEFRDCLQLARYFGVRASAHAY-DGSLSRLYALFAQACLPPWSKM-KNDHIEPIEWDVMENPFTDLVSLQPSKGMVHIPKGKGIGTEINMEIVNRYKWDGSAY
2CHR Chain:A ((1-368))MKIDAIEAVIVDVPTKRPIQMSITTVHQQSYVIVRVY-SEGLVGVGEGGSVGGPVWSAECAETIKIIVERYLAPHLLGTDAFNVSGALQTMARAVTGNASAKAAVEMALLDLKARALGVSIAELLGGPLRSAIPIAWTLA-SGDT--KRD--LDSAVEMIERRRHNRFKVKLGFR-SPQDDLIHMEALSNSLGSKAYLRVDVNQAWDEQVASVYIPELEA-LGVELIEQPVGRENTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEASGIASYGGTMLDSTIGTSVALQLYSTVPS-LPFGCELI--GP-F-VLADTLS-HEPLEIRDYELQVPTGVGHGMTLDEDKVRQYAR-----


General information:
TITO was launched using:
RESULT:

Template: 2CHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2111 -216042 -102.34 -613.75
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -102.34
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.392

(partial model without unconserved sides chains):
PDB file : Tito_2CHR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2CHR-query.scw
PDB file : Tito_Scwrl_2CHR.pdb: