Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKTMSAIT----AAAAVTSCFTGFGAASFSAPAKAA-AQTNTLSENTNQSAAELVKNLYNTAYKGEMPQQAQG------------LTINKSTKGDVHAAFGEPERPVGGDNRFDLYHWNMGQPGYG-FSYHKDMTIS-------EIRYFGTGVERQLNLG---GVTPEVLQKQLGPVNRVLTVPFTDEIDYVYDTGRYEL---HFVIGTDQTADHVNLKAK
4QRK Chain:A ((9-220))KPKEEIKIVEPNGAEKTKLNLNFGVGKLNISGNEEKLMKGKFIYSENEWKPEIKYEVKDKDGELEISQPGLKSGNVSLNNKRNEWNINLNEKIPTEIKLSLGT------GEFKADLSKINLKELNVGMGVGKVDLDISGNYKNNVKVNIEGGVGEATVYLPKSIGVKIKA-EKGVGAVN---ANGFIVEGENIYKNSQYGKSKNSIEVNIEAGVGAINIKQK


General information:
TITO was launched using:
RESULT:

Template: 4QRK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1026 -41050 -40.01 -226.79
target 2D structure prediction score : 0.34
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -40.01
2D Compatibility (Sec. Struct. Predict.) : 0.34
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.080

(partial model without unconserved sides chains):
PDB file : Tito_4QRK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4QRK-query.scw
PDB file : Tito_Scwrl_4QRK.pdb: