Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTHSFAVPRSVEWKETAITILNQQKLPDETEYLELTTKEDVFDAIVTLKVRGAPAIGITAAFGLALAAKDIETDNVTEFRRRLEDIKQYLNSSRPTAINLSWALERLSHSVENAIS----VNEAKTNLVHEAIQIQVEDEETCRLIGQNALQLFKKGDRIMTICNAGSIATSRYGTALAPFYLAKQKDLGLHIYACETRPVLQGSRLTAWELMQGGIDVTLITDSMAAHTMKEKQISAVIVGADRIAKNGDTANKIGTYGLAILANAFDIPFFVAAPLSTFDTKVKCGADIPIEERDPEEVRQISGVRTAPSNVPVFNPAFDITPHDLISGIITEKGIMTGNYEEEIEQLFKGEKVH
3A11 Chain:D ((25-313))---------------------------------------EIAEKIKNMEIRGAGKIARSAAYALQLQAEKSKATNVDEFWKEMKQAAKILFETRPTAVSLPNALRYVMHRGKIAYSSGADLEQLRFVIINAAKEFIHNSEKALERIGEFGAKRIEDGDVIMTHCHSKA--------AISVMKTAWEQGKDIKVIVTETRPKWQG-KITAKELASYGIPVIYVVDSAARHYMK--MTDKVVMGADSITVNGAVINKIGTALIALTAKEHRVWTMIAAETYKFHPETMLGQLV--EMRDPTEVIPEDELKTWPKNIEVWNPAFDVTPPEYVDVIITERGII------------------


General information:
TITO was launched using:
RESULT:

Template: 3A11.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1494 -165352 -110.68 -584.28
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain D : 0.73

3D Compatibility (PKB) : -110.68
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.492

(partial model without unconserved sides chains):
PDB file : Tito_3A11.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3A11-query.scw
PDB file : Tito_Scwrl_3A11.pdb: