Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTMQIKIKYLDETQTRISKIEQGDWIDLRAAEDVTIKKDEFKLVPLGVAMELPEGYEAHVVPRSSTYKNFGVIQTNSMGVIDESYKGDNDFWFFPAYALRDTEIKKGDRICQFRIMKKMPAVELVEVEHLGNEDRGGLGSTGTK
4AOO Chain:C ((3-144))--MQIKIKYLDETQTRISKIEQGDWIDLRAAEDVTIKKDEFKLVPLGVAMELPEGYEAHVVPRSSTYKNFGVIQTNSMGVIDESYKGDNDFWFFPAYALRDTEIKKGDRICQFRIMKKMPAVELVEVEHLGNEDRGGLGSTGTK


General information:
TITO was launched using:
RESULT:

Template: 4AOO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 537 -64480 -120.07 -454.08
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain C : 0.99

3D Compatibility (PKB) : -120.07
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.99
QMean score : 0.520

(partial model without unconserved sides chains):
PDB file : Tito_4AOO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4AOO-query.scw
PDB file : Tito_Scwrl_4AOO.pdb: