Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MKKRITYSLLALLAVVAFAFTDSSKAKAAEALPLYYLQITGITSDGNDFAWDNLTSSQTKAPNVLKGNKLYVKARFMGYTKLTVITG-KDGKNLLYNGTAKMFK-SDAILGQNKVVIGWDKYFEIPMDALQDNSIQIKALSSGTTF-VYSQKID-FERE 2LR4 Chain:A ((1-128)) ---------------------------GAEALPLYYLQITGITSDGNDFAWDNLTSSQTKAPNVLKGNKLYVKARFMGYTKLTV-ITGKDGKNLLYN-GTAKMFKSDAILGQNKVVIGWDKYFEIPMDALQDNSIQIKALSSGTTFVYSQKIDFERE--

General information: TITO was launched using: RESULT: Template: 2LR4.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 561 -18307 -32.63 -147.63 target 2D structure prediction score : 0.56 Monomeric hydrophicity matching model chain A : 0.83 3D Compatibility (PKB) : -32.63 2D Compatibility (Sec. Struct. Predict.) : 0.56 1D Compatibility (Hydrophobicity) : 0.83 QMean score : 0.432

(partial model without unconserved sides chains): PDB file : Tito_2LR4.pdb: (Unconserved sides chains are recalculated) : Sequence: align-2LR4-query.scw PDB file : Tito_Scwrl_2LR4.pdb: